BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H12SP1|AL428990
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1702 0.0
>3x_Contig1737
Length = 17214
Score = 1702 bits (856), Expect = 0.0
Identities = 870/876 (99%), Gaps = 1/876 (0%)
Strand = Plus / Minus
Query: 1 atcgtccagtaattcagcagaccgtccagttttctatcgggttgtgttactcgaagcgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5078 atcgtccagtaattcagcagaccgtccagttttctatcgggttgtgttactcgaagcgta 5019
Query: 61 ttttcaacgttgcaaccaacagtgataaaagacttttccgataaggtcaacagaacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5018 ttttcaacgttgcaaccaacagtgataaaagacttttccgataaggtcaacagaacttga 4959
Query: 121 gcttttctgtctagcataggccatggttccatcgcgataaaggaaaattagtcatcgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4958 gcttttctgtctagcataggccatggttccatcgcgataaaggaaaattagtcatcgttg 4899
Query: 181 atcgtctggtataagaaggtttgccttttgtatatcattcttggtagtatccggtagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 atcgtctggtataagaaggtttgccttttgtatatcattcttggtagtatccggtagttc 4839
Query: 241 tcagawagttctcagawagttcattgaacctggagaagaagagcttgattcatcgagcca 300
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4838 tcagatagttctcagatagttcattgaacctggagaagaagagcttgattcatcgagcca 4779
Query: 301 ttctcgcaaagtatgtacataccaagtcatttagaggttactgatttagacaagcaggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4778 ttctcgcaaagtatgtacataccaagtcatttagaggttactgatttagacaagcaggtc 4719
Query: 361 agcgtcataaaacaatacccgttgggkgtattgttcaattacaattccgcaaagacgggt 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4718 agcgtcataaaacaatacccgttgggtgtattgttcaattacaattccgcaaagacgggt 4659
Query: 421 ttattggactatttcaagtctggkaagccaccttcgggaaccgaccgtgtggattctgtc 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4658 ttattggactatttcaagtctggtaagccaccttcgggaaccgaccgtgtggattctgtc 4599
Query: 481 atgtgtgccactcatgtgccattccattacgtagaggatccgga-ggcaagaccaagggt 539
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4598 atgtgtgctactcatgtgccattccattacgtagaggatccggagggcaagaccaagggt 4539
Query: 540 aaattgatcgcccatttggctgggcagaaccagcatattgccatgcttgaagagaacgct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4538 aaattgatcgcccatttggctgggcagaaccagcatattgccatgcttgaagagaacgct 4479
Query: 600 aactgcttagtggttttccagagtgtggactcgtatgtgtctccggaatggtatccgttg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4478 aactgcttagtggttttccagagtgtggactcgtatgtgtctccggaatggtatccgttg 4419
Query: 660 aagaagaagacgcataagttcgttccgacctgggattttgcgtgcgttcacgtttacggt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4418 aagaagaagacgcataagttcgttccgacctgggattttgcgtgcgttcacgtttacggt 4359
Query: 720 agggccaagatcattcatgatgacgaggaatggttgctgggtatgttgaattcgatcaca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4358 agggccaagatcattcatgatgacgaggaatggttgctgggtatgttgaattcgatcaca 4299
Query: 780 gaccaagaggaaaagaaacgtccagatacgacgactgtttccgagaaagatgaagatcac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4298 gaccaagaggaaaagaaacgtccagatacgacgactgtttccgagaaagatgaagatcac 4239
Query: 840 tccggtgagaaaggcgaggtcccgatccaccgctgg 875
||||||||||||||||||||||||||||||||||||
Sbjct: 4238 tccggtgagaaaggcgaggtcccgatccaccgctgg 4203
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5532
Number of Sequences: 1807
Number of extensions: 5532
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)